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    BMCBI
    2011
    229views Artificial Intelligence» more  BMCBI 2011»
    The PathOlogist: An Automated Tool for Pathway-Centric Analysis
    13 years 2 months ago
    The PathOlogist: An Automated Tool for Pathway-Centric Analysis
    Download  www.biomedcentral.com
    Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
    Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...
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    BMCBI
    2008
    172views more  BMCBI 2008»
    Compo: composite motif discovery using discrete models
    13 years 8 months ago
    Compo: composite motif discovery using discrete models
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    Background: Computational discovery of motifs in biomolecular sequences is an established field, with applications both in the discovery of functional sites in proteins and regula...
    Geir Kjetil Sandve, Osman Abul, Finn Drablø...
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    CGF
    2010
    189views more  CGF 2010»
    Space-in-Time and Time-in-Space Self-Organizing Maps for Exploring Spatiotemporal Patterns
    13 years 8 months ago
    Space-in-Time and Time-in-Space Self-Organizing Maps for Exploring Spatiotemporal Patterns
    Download  www.gris.informatik.tu-darmstadt.de
    Spatiotemporal data pose serious challenges to analysts in geographic and other domains. Owing to the complexity of the geospatial and temporal components, this kind of data canno...
    Gennady L. Andrienko, Natalia V. Andrienko, Sebast...
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    BMCBI
    2006
    120views more  BMCBI 2006»
    An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse
    13 years 8 months ago
    An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse
    Download  www.biomedcentral.com
    Background: Many statistical algorithms combine microarray expression data and genome sequence data to identify transcription factor binding motifs in the low eukaryotic genomes. ...
    Ryung S. Kim, Hongkai Ji, Wing Hung Wong
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    SDM
    2012
    SIAM
    297views Data Mining» more  SDM 2012»
    A Flexible Open-Source Toolbox for Scalable Complex Graph Analysis
    11 years 10 months ago
    A Flexible Open-Source Toolbox for Scalable Complex Graph Analysis
    Download  www.cs.ucsb.edu
    The Knowledge Discovery Toolbox (KDT) enables domain experts to perform complex analyses of huge datasets on supercomputers using a high-level language without grappling with the ...
    Adam Lugowski, David M. Alber, Aydin Buluç,...
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