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» Accelerating Protein Classification Using Suffix Trees
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KDD
2006
ACM
179views Data Mining» more  KDD 2006»
14 years 7 months ago
Extracting key-substring-group features for text classification
In many text classification applications, it is appealing to take every document as a string of characters rather than a bag of words. Previous research studies in this area mostl...
Dell Zhang, Wee Sun Lee
ISMB
1993
13 years 8 months ago
Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification
Molecular sequence megaclassification is a technique for automated protein sequence analysis and annotation. Implementation of the method has been limited by the need to store and...
David J. States, Nomi L. Harris, Lawrence Hunter
COMCOM
2004
149views more  COMCOM 2004»
13 years 7 months ago
Accelerating network security services with fast packet classification
To protect a network, secure network systems such as intrusion detection system (IDS) and firewall are often installed to control or monitor network traffic. These systems often i...
Shiuh-Pyng Shieh, Fu-Yuan Lee, Ya-Wen Lin
TCBB
2010
112views more  TCBB 2010»
13 years 2 months ago
A Study of Hierarchical and Flat Classification of Proteins
Automatic classification of proteins using machine learning is an important problem that has received significant attention in the literature. One feature of this problem is that e...
Arthur Zimek, Fabian Buchwald, Eibe Frank, Stefan ...
IPPS
2009
IEEE
14 years 2 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell