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» Active Clustering of Biological Sequences
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ASWEC
2008
IEEE
13 years 9 months ago
Root Cause Analysis Using Sequence Alignment and Latent Semantic Indexing
Automatic identification of software faults has enormous practical significance. This requires characterizing program execution behavior. Equally important is the aspect of diagno...
R. P. Jagadeesh Chandra Bose, U. Suresh
ECAI
2004
Springer
14 years 1 months ago
Learning Complex and Sparse Events in Long Sequences
The Hierarchical Hidden Markov Model (HHMM) is a well formalized tool suitable to model complex patterns in long temporal or spatial sequences. Even if effective algorithms are ava...
Marco Botta, Ugo Galassi, Attilio Giordana
RECOMB
2008
Springer
14 years 8 months ago
CompostBin: A DNA Composition-Based Algorithm for Binning Environmental Shotgun Reads
A major hindrance to studies of microbial diversity has been that the vast majority of microbes cannot be cultured in the laboratory and thus are not amenable to traditional method...
Sourav Chatterji, Ichitaro Yamazaki, Zhaojun Bai, ...
RECOMB
2010
Springer
14 years 2 months ago
A Novel Abundance-Based Algorithm for Binning Metagenomic Sequences Using l-Tuples
Abstract. Metagenomics is the study of microbial communities sampled directly from their natural environment, without prior culturing. Among the computational tools recently develo...
Yu-Wei Wu, Yuzhen Ye
CONCUR
2005
Springer
14 years 1 months ago
Concurrent Clustered Programming
d Abstract) Vijay Saraswat1 and Radha Jagadeesan2 1 IBM T.J. Watson Research Lab 2 School of CTI, DePaul University Abstract. We present the concurrency and distribution primitives...
Vijay A. Saraswat, Radha Jagadeesan