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» Active Clustering of Biological Sequences
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BMCBI
2005
130views more  BMCBI 2005»
13 years 7 months ago
Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome
Background: This paper addresses the problem of recognising DNA cis-regulatory modules which are located far from genes. Experimental procedures for this are slow and costly, and ...
Irina I. Abnizova, Rene te Boekhorst, Klaudia Walt...
IWPC
2006
IEEE
14 years 1 months ago
Studying the Evolution of Software Systems Using Change Clusters
In this paper, we present an approach that examines the evolution of code stored in source control repositories. The technique identifies Change Clusters, which can help managers...
Jay Kothari, Ali Shokoufandeh, Spiros Mancoridis, ...
MMM
2007
Springer
108views Multimedia» more  MMM 2007»
14 years 1 months ago
Utility-Based Summarization of Home Videos
The aim of this work is to devise an effective method for static summarization of home video sequences. Based on the premise that the user watching a summary is interested in peop...
Ba Tu Truong, Svetha Venkatesh
SP
2008
IEEE
122views Security Privacy» more  SP 2008»
13 years 7 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...
BMCBI
2005
109views more  BMCBI 2005»
13 years 7 months ago
Genome comparison without alignment using shortest unique substrings
Background: Sequence comparison by alignment is a fundamental tool of molecular biology. In this paper we show how a number of sequence comparison tasks, including the detection o...
Bernhard Haubold, Nora Pierstorff, Friedrich M&oum...