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    » Active Clustering of Biological Sequences
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    BIBM
    2008
    IEEE
    170views Bioinformatics» more  BIBM 2008»
    Protein Sequence Motif Super-Rule-Tree (SRT) Structure Constructed by Hybrid Hierarchical K-Means Clustering Algorithm
    14 years 2 months ago
    Protein Sequence Motif Super-Rule-Tree (SRT) Structure Constructed by Hybrid Hierarchical K-Means Clustering Algorithm
    Download  www.cs.gsu.edu
    — Protein sequence motifs information is crucial to the analysis of biologically significant regions. The conserved regions have the potential to determine the role of the protei...
    Bernard Chen, Jieyue He, Stephen Pellicer, Yi Pan
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    BMCBI
    2008
    143views more  BMCBI 2008»
    Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering
    13 years 7 months ago
    Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering
    Download  www.biomedcentral.com
    Background: The identification and study of proteins from metagenomic datasets can shed light on the roles and interactions of the source organisms in their communities. However, ...
    Shibu Yooseph, Weizhong Li, Granger G. Sutton
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    BMCBI
    2011
    251views Artificial Intelligence» more  BMCBI 2011»
    Motif-guided sparse decomposition of gene expression data for regulatory module identification
    13 years 2 months ago
    Motif-guided sparse decomposition of gene expression data for regulatory module identification
    Download  www.biomedcentral.com
    Background: Genes work coordinately as gene modules or gene networks. Various computational approaches have been proposed to find gene modules based on gene expression data; for e...
    Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggi...
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    PAMI
    2007
    138views more  PAMI 2007»
    A Fast Biologically Inspired Algorithm for Recurrent Motion Estimation
    13 years 7 months ago
    A Fast Biologically Inspired Algorithm for Recurrent Motion Estimation
    Download  www.decisionsinmotion.org
    —We have previously developed a neurodynamical model of motion segregation in cortical visual area V1 and MT of the dorsal stream. The model explains how motion ambiguities cause...
    Pierre Bayerl, Heiko Neumann
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    SAC
    2009
    ACM
    139views Applied Computing» more  SAC 2009»
    A new protein motif extraction framework based on constrained co-clustering
    14 years 2 months ago
    A new protein motif extraction framework based on constrained co-clustering
    Download  compbio.di.unito.it
    Signal finding (pattern discovery) in biological sequences is a fundamental problem in both computer science and molecular biology. Many approaches have been proposed for extract...
    Francesca Cordero, Alessia Visconti, Marco Botta
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