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BMCBI
2008
122views more  BMCBI 2008»
13 years 7 months ago
ESLpred2: improved method for predicting subcellular localization of eukaryotic proteins
Background: The expansion of raw protein sequence databases in the post genomic era and availability of fresh annotated sequences for major localizations particularly motivated us...
Aarti Garg, Gajendra P. S. Raghava
KDD
2004
ACM
166views Data Mining» more  KDD 2004»
14 years 7 months ago
Predicting prostate cancer recurrence via maximizing the concordance index
In order to effectively use machine learning algorithms, e.g., neural networks, for the analysis of survival data, the correct treatment of censored data is crucial. The concordan...
Lian Yan, David Verbel, Olivier Saidi
BMCBI
2008
170views more  BMCBI 2008»
13 years 7 months ago
A genetic approach for building different alphabets for peptide and protein classification
Background: In this paper, it is proposed an optimization approach for producing reduced alphabets for peptide classification, using a Genetic Algorithm. The classification task i...
Loris Nanni, Alessandra Lumini
BMCBI
2008
101views more  BMCBI 2008»
13 years 7 months ago
Term-tissue specific models for prediction of gene ontology biological processes using transcriptional profiles of aging in dros
Background: Predictive classification on the base of gene expression profiles appeared recently as an attractive strategy for identifying the biological functions of genes. Gene O...
Wensheng Zhang, Sige Zou, Jiuzhou Song
BMCBI
2008
145views more  BMCBI 2008»
13 years 7 months ago
Directed acyclic graph kernels for structural RNA analysis
Background: Recent discoveries of a large variety of important roles for non-coding RNAs (ncRNAs) have been reported by numerous researchers. In order to analyze ncRNAs by kernel ...
Kengo Sato, Toutai Mituyama, Kiyoshi Asai, Yasubum...