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» Adversarial Sequence Prediction
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129
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NAR
2008
127views more  NAR 2008»
15 years 3 months ago
miRBase: tools for microRNA genomics
miRBase is the central online repository for microRNA (miRNA) nomenclature, sequence data, annotation and target prediction. The current release (10.0) contains 5071 miRNA loci fr...
Sam Griffiths-Jones, Harpreet Kaur Saini, Stijn va...
118
Voted
ICMLA
2008
15 years 5 months ago
A Clustering Approach in Developing Prognostic Systems of Cancer Patients
Accurate prediction of survival rates of cancer patients is often key to stratify patients for prognosis and treatment. Survival prediction is often accomplished by the TNM system...
Dechang Chen, Kai Xing, Donald Henson, Li Sheng, A...
141
Voted
BMCBI
2010
133views more  BMCBI 2010»
15 years 3 months ago
Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical
Background: Many structural properties such as solvent accessibility, dihedral angles and helix-helix contacts can be assigned to each residue in a membrane protein. Independent s...
Shandar Ahmad, Yumlembam Hemjit Singh, Yogesh Paud...
134
Voted
BMCBI
2008
122views more  BMCBI 2008»
15 years 3 months ago
Grammar-based distance in progressive multiple sequence alignment
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
David J. Russell, Hasan H. Otu, Khalid Sayood
GECCO
2006
Springer
176views Optimization» more  GECCO 2006»
15 years 7 months ago
A genetic algorithm with backtracking for protein structure prediction
In this paper, we propose a simple genetic algorithm for finding the optimal conformation of a protein using the three-dimensional square HP model. A backtracking procedure is use...
Clayton Matthew Johnson, Anitha Katikireddy