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» Adversarial Sequence Prediction
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JMLR
2010
92views more  JMLR 2010»
13 years 3 months ago
Posterior distributions are computable from predictive distributions
As we devise more complicated prior distributions, will inference algorithms keep up? We highlight a negative result in computable probability theory by Ackerman, Freer, and Roy (...
Cameron E. Freer, Daniel M. Roy
IDA
2009
Springer
14 years 3 months ago
Improving Time Series Forecasting by Discovering Frequent Episodes in Sequences
Abstract. This work aims to improve an existing time series forecasting algorithm –LBF– by the application of frequent episodes techniques as a complementary step to the model....
Francisco Martínez-Álvarez, Alicia T...
IPPS
2008
IEEE
14 years 3 months ago
On the Effectiveness of Rebuilding RNA Secondary Structures from Sequence Chunks
Despite the computing power of emerging technologies, predicting long RNA secondary structures with thermodynamics-based methods is still infeasible, especially if the structures ...
Michela Taufer, Thamar Solorio, Abel Licon, David ...
BMCBI
2008
124views more  BMCBI 2008»
13 years 9 months ago
Computational identification of ubiquitylation sites from protein sequences
Background: Ubiquitylation plays an important role in regulating protein functions. Recently, experimental methods were developed toward effective identification of ubiquitylation...
Chun-Wei Tung, Shinn-Ying Ho
RECOMB
2005
Springer
14 years 9 months ago
Using Multiple Alignments to Improve Gene Prediction
The multiple species de novo gene prediction problem can be stated as follows: given an alignment of genomic sequences from two or more organisms, predict the location and structur...
Samuel S. Gross, Michael R. Brent