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BMCBI
2008
123views more  BMCBI 2008»
13 years 9 months ago
Pol II promoter prediction using characteristic 4-mer motifs: a machine learning approach
Background: Eukaryotic promoter prediction using computational analysis techniques is one of the most difficult jobs in computational genomics that is essential for constructing a...
Firoz Anwar, Syed Murtuza Baker, Taskeed Jabid, Md...
ICS
1999
Tsinghua U.
14 years 1 months ago
Improving virtual function call target prediction via dependence-based pre-computation
We introduce dependence-based pre-computation as a complement to history-based target prediction schemes. We present pre-computation in the context of virtual function calls (v-ca...
Amir Roth, Andreas Moshovos, Gurindar S. Sohi
HPDC
2010
IEEE
13 years 10 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
BMCBI
2006
144views more  BMCBI 2006»
13 years 9 months ago
ProFAT: a web-based tool for the functional annotation of protein sequences
Background: The functional annotation of proteins relies on published information concerning their close and remote homologues in sequence databases. Evidence for remote sequence ...
Charles Richard Bradshaw, Vineeth Surendranath, Bi...
CSB
2004
IEEE
115views Bioinformatics» more  CSB 2004»
14 years 17 days ago
PoPS: A Computational Tool for Modeling and Predicting Protease Specificity
Proteases play a fundamental role in the control of intra- and extracellular processes by binding and cleaving specific amino acid sequences. Identifying these targets is extremel...
Sarah E. Boyd, Maria J. García de la Banda,...