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BMCBI
2006
242views more  BMCBI 2006»
13 years 7 months ago
Predicting residue-wise contact orders in proteins by support vector regression
Background: The residue-wise contact order (RWCO) describes the sequence separations between the residues of interest and its contacting residues in a protein sequence. It is a ne...
Jiangning Song, Kevin Burrage
ICML
2004
IEEE
14 years 8 months ago
Gaussian process classification for segmenting and annotating sequences
Many real-world classification tasks involve the prediction of multiple, inter-dependent class labels. A prototypical case of this sort deals with prediction of a sequence of labe...
Yasemin Altun, Thomas Hofmann, Alex J. Smola
NAR
2007
145views more  NAR 2007»
13 years 7 months ago
FLAN: a web server for influenza virus genome annotation
FLAN (short for FLu ANnotation), the NCBI web server for genome annotation of influenza virus (http://www.ncbi.nlm.nih.gov/genomes/FLU/ Database/annotation.cgi) is a tool for user...
Yiming Bao, Pavel Bolotov, Dmitry Dernovoy, Boris ...
BIBM
2008
IEEE
142views Bioinformatics» more  BIBM 2008»
14 years 2 months ago
Using Global Sequence Similarity to Enhance Biological Sequence Labeling
Identifying functionally important sites from biological sequences, formulated as a biological sequence labeling problem, has broad applications ranging from rational drug design ...
Cornelia Caragea, Jivko Sinapov, Drena Dobbs, Vasa...
SDM
2008
SIAM
130views Data Mining» more  SDM 2008»
13 years 9 months ago
Mining Sequence Classifiers for Early Prediction
Supervised learning on sequence data, also known as sequence classification, has been well recognized as an important data mining task with many significant applications. Since te...
Zhengzheng Xing, Jian Pei, Guozhu Dong, Philip S. ...