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DEBU
2008
125views more  DEBU 2008»
13 years 8 months ago
Querying XML in Timber
In this paper, we describe the TIMBER XML database system implemented at University of Michigan. TIMBER was one of the first native XML database systems, designed from the ground ...
Yuqing Wu, Stelios Paparizos, H. V. Jagadish
BMCBI
2006
127views more  BMCBI 2006»
13 years 8 months ago
Automatic discovery of cross-family sequence features associated with protein function
Background: Methods for predicting protein function directly from amino acid sequences are useful tools in the study of uncharacterised protein families and in comparative genomic...
Markus Brameier, Josien Haan, Andrea Krings, Rober...
BMCBI
2006
98views more  BMCBI 2006»
13 years 8 months ago
Optimised amino acid specific weighting factors for unbound protein docking
Background: One of the most challenging aspects of protein-protein docking is the inclusion of flexibility into the docking procedure. We developed a postfilter where the grid-rep...
Philipp Heuser, Dietmar Schomburg
JSAT
2008
122views more  JSAT 2008»
13 years 8 months ago
SAT Algorithms for Colouring Some Special Classes of Graphs: Some Theoretical and Experimental Results
The local search algorithm GSAT is based on the notion of Satisfiability. It has been used successfully for colouring graphs, solving instances of the 3SAT problem, planning block...
Sriyankar Acharyya
JLP
2006
138views more  JLP 2006»
13 years 8 months ago
Algebraic-coalgebraic specification in CoCasl
We introduce CoCasl as a light-weight but expressive coalgebraic extension of the algebraic specification language Casl. CoCasl allows the nested combination of algebraic datatype...
Till Mossakowski, Lutz Schröder, Markus Rogge...