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BMCBI
2011
13 years 4 months ago
Flexible taxonomic assignment of ambiguous sequencing reads
Background: To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference ...
José Carlos Clemente, Jesper Jansson, Gabri...
BMCBI
2011
13 years 4 months ago
Tiling array data analysis: a multiscale approach using wavelets
Background: Tiling array data is hard to interpret due to noise. The wavelet transformation is a widely used technique in signal processing for elucidating the true signal from no...
Alexander Karpikov, Joel S. Rozowsky, Mark Gerstei...
BMCBI
2011
13 years 4 months ago
Motif-guided sparse decomposition of gene expression data for regulatory module identification
Background: Genes work coordinately as gene modules or gene networks. Various computational approaches have been proposed to find gene modules based on gene expression data; for e...
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggi...
CCR
2011
13 years 4 months ago
Measured impact of crooked traceroute
Data collected using traceroute-based algorithms underpins research into the Internet’s router-level topology, though it is possible to infer false links from this data. One sou...
Matthew J. Luckie, Amogh Dhamdhere, kc claffy, Dav...
COLING
2010
13 years 3 months ago
Recognizing Medication related Entities in Hospital Discharge Summaries using Support Vector Machine
Due to the lack of annotated data sets, there are few studies on machine learning based approaches to extract named entities (NEs) in clinical text. The 2009 i2b2 NLP challenge is...
Son Doan, Hua Xu
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