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BMCBI
2010
104views more  BMCBI 2010»
13 years 7 months ago
Parameters for accurate genome alignment
Background: Genome sequence alignments form the basis of much research. Genome alignment depends on various mundane but critical choices, such as how to mask repeats and which sco...
Martin C. Frith, Michiaki Hamada, Paul Horton
BMCBI
2010
154views more  BMCBI 2010»
13 years 7 months ago
Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
Background: A major goal of molecular biology is determining the mechanisms that control the transcription of genes. Motif Enrichment Analysis (MEA) seeks to determine which DNA-b...
Robert C. McLeay, Timothy L. Bailey
SODA
2012
ACM
177views Algorithms» more  SODA 2012»
11 years 9 months ago
Stochastic coalescence in logarithmic time
The following distributed coalescence protocol was introduced by Dahlia Malkhi in 2006 motivated by applications in social networking. Initially there are n agents wishing to coal...
Po-Shen Loh, Eyal Lubetzky
MOBISYS
2007
ACM
14 years 7 months ago
MobiSteer: using steerable beam directional antenna for vehicular network access
In this work, we investigate the use of directional antennas and beam steering techniques to improve performance of 802.11 links in the context of communication between a moving v...
Vishnu Navda, Anand Prabhu Subramanian, Kannan Dha...
ICML
2002
IEEE
14 years 8 months ago
Learning the Kernel Matrix with Semi-Definite Programming
Kernel-based learning algorithms work by embedding the data into a Euclidean space, and then searching for linear relations among the embedded data points. The embedding is perfor...
Gert R. G. Lanckriet, Nello Cristianini, Peter L. ...