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SIGMETRICS
2008
ACM
130views Hardware» more  SIGMETRICS 2008»
13 years 7 months ago
Using probabilistic model checking in systems biology
Probabilistic model checking is a formal verification framework for systems which exhibit stochastic behaviour. It has been successfully applied to a wide range of domains, includ...
Marta Z. Kwiatkowska, Gethin Norman, David Parker
CMSB
2006
Springer
13 years 11 months ago
Probabilistic Model Checking of Complex Biological Pathways
Abstract. Probabilistic model checking is a formal verification technique that has been successfully applied to the analysis of systems from a broad range of domains, including sec...
John Heath, Marta Z. Kwiatkowska, Gethin Norman, D...
FMSB
2008
199views Formal Methods» more  FMSB 2008»
13 years 9 months ago
Bounded Asynchrony: Concurrency for Modeling Cell-Cell Interactions
We introduce bounded asynchrony, a notion of concurrency tailored to the modeling of biological cell-cell interactions. Bounded asynchrony is the result of a scheduler that bounds ...
Jasmin Fisher, Thomas A. Henzinger, Maria Mateescu...
BMCBI
2008
188views more  BMCBI 2008»
13 years 7 months ago
anNET: a tool for network-embedded thermodynamic analysis of quantitative metabolome data
Background: Compared to other omics techniques, quantitative metabolomics is still at its infancy. Complex sample preparation and analytical procedures render exact quantification...
Nicola Zamboni, Anne Kümmel, Matthias Heinema...