Storage mapping optimization is a flexible approach to folding array dimensions in numerical codes. It is designed to reduce the memory footprint after a wide spectrum of loop tr...
Analysis of biopolymer sequences and structures generally adopts one of two approaches: use of detailed biophysical theoretical models of the system with experimentally-determined...
Scott C. Schmidler, Joseph E. Lucas, Terrence G. O...
—The most pervasive compute operation carried out in almost all bioinformatics applications is pairwise sequence homology detection (or sequence alignment). Due to exponentially ...
During the last years, speed-up techniques for DIJKSTRA’s algorithm have been developed that make the computation of shortest paths a matter of microseconds even on huge road net...
Reinhard Bauer, Gianlorenzo D'Angelo, Daniel Delli...
Motivated by the quantum algorithm for testing commutativity of black-box groups (Magniez and Nayak, 2007), we study the following problem: Given a black-box finite ring by an add...