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» Algorithms for Challenging Motif Problems
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BMCBI
2008
83views more  BMCBI 2008»
13 years 8 months ago
An efficient genetic algorithm for structural RNA pairwise alignment and its application to non-coding RNA discovery in yeast
Background: Aligning RNA sequences with low sequence identity has been a challenging problem since such a computation essentially needs an algorithm with high complexities for tak...
Akito Taneda
RECOMB
2002
Springer
14 years 8 months ago
Monotony of surprise and large-scale quest for unusual words
The problem of characterizing and detecting recurrent sequence patterns such as substrings or motifs and related associations or rules is variously pursued in order to compress da...
Alberto Apostolico, Mary Ellen Bock, Stefano Lonar...
DFG
2009
Springer
14 years 2 months ago
Engineering Route Planning Algorithms
Algorithms for route planning in transportation networks have recently undergone a rapid development, leading to methods that are up to three million times faster than Dijkstra’s...
Daniel Delling, Peter Sanders, Dominik Schultes, D...
AIR
2010
97views more  AIR 2010»
13 years 8 months ago
A unified framework for improving the accuracy of all holistic face identification algorithms
Abstract Reconstructing the challenging human face identification process as a stability problem, we show that Electoral College can be used as a framework that provides a signific...
Liang Chen, Naoyuki Tokuda
GCB
2006
Springer
140views Biometrics» more  GCB 2006»
13 years 11 months ago
PALMA: Perfect Alignments using Large Margin Algorithms
: Despite many years of research on how to properly align sequences in the presence of sequencing errors, alternative splicing and micro-exons, the correct alignment of mRNA sequen...
Gunnar Rätsch, Bettina Hepp, Uta Schulze, Che...