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» Algorithms for Finding Gene Clusters
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134
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ICDM
2005
IEEE
215views Data Mining» more  ICDM 2005»
15 years 8 months ago
CLUGO: A Clustering Algorithm for Automated Functional Annotations Based on Gene Ontology
We address the issue of providing highly informative and comprehensive annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a...
In-Yee Lee, Jan-Ming Ho, Ming-Syan Chen
KDD
2009
ACM
208views Data Mining» more  KDD 2009»
16 years 3 months ago
A principled and flexible framework for finding alternative clusterings
The aim of data mining is to find novel and actionable insights in data. However, most algorithms typically just find a single (possibly non-novel/actionable) interpretation of th...
Zijie Qi, Ian Davidson
158
Voted
EVOW
2010
Springer
15 years 1 months ago
Finding Gapped Motifs by a Novel Evolutionary Algorithm
Background: Identifying approximately repeated patterns, or motifs, in DNA sequences from a set of co-regulated genes is an important step towards deciphering the complex gene reg...
Chengwei Lei, Jianhua Ruan
94
Voted
BIOINFORMATICS
2000
99views more  BIOINFORMATICS 2000»
15 years 2 months ago
GeneRAGE: a robust algorithm for sequence clustering and domain detection
Motivation: Efficient, accurate and automatic clustering of large protein sequence datasets, such as complete proteomes, into families, according to sequence similarity. Detection...
Anton J. Enright, Christos A. Ouzounis
121
Voted
HAIS
2008
Springer
15 years 3 months ago
Clustering Likelihood Curves: Finding Deviations from Single Clusters
For systematic analyses of quantitative mass spectrometry data a method was developed in order to reveal peptides within a protein, that show differences in comparison with the rem...
Claudia Hundertmark, Frank Klawonn