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» Algorithms for Large, Sparse Network Alignment Problems
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BMCBI
2006
166views more  BMCBI 2006»
15 years 2 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
125
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TIP
2008
169views more  TIP 2008»
15 years 2 months ago
Maximum Likelihood Wavelet Density Estimation With Applications to Image and Shape Matching
Density estimation for observational data plays an integral role in a broad spectrum of applications, e.g. statistical data analysis and information-theoretic image registration. ...
Adrian M. Peter, Anand Rangarajan
ICDE
2008
IEEE
190views Database» more  ICDE 2008»
16 years 4 months ago
Adaptive Segmentation for Scientific Databases
In this paper we explore database segmentation in the context of a column-store DBMS targeted at a scientific database. We present a novel hardware- and scheme-oblivious segmentati...
Milena Ivanova, Martin L. Kersten, Niels Nes
BMCBI
2010
130views more  BMCBI 2010»
15 years 2 months ago
Amino acid "little Big Bang": Representing amino acid substitution matrices as dot products of Euclidian vectors
Background: Sequence comparisons make use of a one-letter representation for amino acids, the necessary quantitative information being supplied by the substitution matrices. This ...
Karel Zimmermann, Jean-François Gibrat
GIS
2007
ACM
16 years 3 months ago
Dynamic storage balancing in a distributed spatial index
We propose a general framework to index very large datasets of spatial data in a distributed system. Our proposal is built on the recently proposed Scalable Distributed Rtree (SD-...
Cédric du Mouza, Philippe Rigaux, Witold Li...