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» Algorithms for phylogenetic footprinting
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IPPS
2006
IEEE
14 years 1 months ago
Parallel implementation of a quartet-based algorithm for phylogenetic analysis
This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutio...
Bing Bing Zhou, Daniel Chu, Monther Tarawneh, Ping...
ICCS
2001
Springer
13 years 11 months ago
High-Performance Algorithm Engineering for Computational Phylogenetics
Abstract. Phylogeny reconstruction from molecular data poses complex optimization problems: almost all optimization models are NP-hard and thus computationally intractable. Yet app...
Bernard M. E. Moret, David A. Bader, Tandy Warnow
RECOMB
2001
Springer
14 years 7 months ago
A structural EM algorithm for phylogenetic inference
Nir Friedman, Matan Ninio, Itsik Pe'er, Tal Pupko
CPM
1997
Springer
111views Combinatorics» more  CPM 1997»
13 years 11 months ago
Approximation Algorithms for the Fixed-Topology Phylogenetic Number Problem
Mary Cryan, Leslie Ann Goldberg, Cynthia A. Philli...