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» Algorithms for phylogenetic footprinting
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VLDB
2002
ACM
106views Database» more  VLDB 2002»
15 years 3 months ago
Approximate Frequency Counts over Data Streams
We present algorithms for computing frequency counts exceeding a user-specified threshold over data streams. Our algorithms are simple and have provably small memory footprints. A...
Gurmeet Singh Manku, Rajeev Motwani
ICCS
2005
Springer
15 years 9 months ago
Phylogenetic Networks, Trees, and Clusters
Phylogenetic networks model evolutionary histories in the presence of non-treelike events such as hybrid speciation and horizontal gene transfer. In spite of their widely acknowled...
Luay Nakhleh, Li-San Wang
JCB
1998
105views more  JCB 1998»
15 years 3 months ago
Constructing and Counting Phylogenetic Invariants
Abstract. The method of invariants is an approach to the problem of reconstructing the phylogenetic tree of a collection of m taxa using nucleotide sequence data. Models for the re...
Steven N. Evans, Xiaowen Zhou
BMCBI
2010
102views more  BMCBI 2010»
15 years 4 months ago
Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
Background: Molecular studies of microbial diversity have provided many insights into the bacterial communities inhabiting the human body and the environment. A common first step ...
James Robert White, Saket Navlakha, Niranjan Nagar...
RECOMB
2008
Springer
16 years 4 months ago
A Phylogenetic Approach to Genetic Map Refinement
Following various genetic mapping techniques conducted on different segregating populations, one or more genetic maps are obtained for a given species. However, recombination analy...
Denis Bertrand, Mathieu Blanchette, Nadia El-Mabro...