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» Algorithms for phylogenetic footprinting
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VLDB
2002
ACM
106views Database» more  VLDB 2002»
13 years 7 months ago
Approximate Frequency Counts over Data Streams
We present algorithms for computing frequency counts exceeding a user-specified threshold over data streams. Our algorithms are simple and have provably small memory footprints. A...
Gurmeet Singh Manku, Rajeev Motwani
ICCS
2005
Springer
14 years 28 days ago
Phylogenetic Networks, Trees, and Clusters
Phylogenetic networks model evolutionary histories in the presence of non-treelike events such as hybrid speciation and horizontal gene transfer. In spite of their widely acknowled...
Luay Nakhleh, Li-San Wang
JCB
1998
105views more  JCB 1998»
13 years 7 months ago
Constructing and Counting Phylogenetic Invariants
Abstract. The method of invariants is an approach to the problem of reconstructing the phylogenetic tree of a collection of m taxa using nucleotide sequence data. Models for the re...
Steven N. Evans, Xiaowen Zhou
BMCBI
2010
102views more  BMCBI 2010»
13 years 7 months ago
Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
Background: Molecular studies of microbial diversity have provided many insights into the bacterial communities inhabiting the human body and the environment. A common first step ...
James Robert White, Saket Navlakha, Niranjan Nagar...
RECOMB
2008
Springer
14 years 7 months ago
A Phylogenetic Approach to Genetic Map Refinement
Following various genetic mapping techniques conducted on different segregating populations, one or more genetic maps are obtained for a given species. However, recombination analy...
Denis Bertrand, Mathieu Blanchette, Nadia El-Mabro...