The Phylogenetic kth Root Problem (PRk) is the problem of finding a (phylogenetic) tree T from a given graph G = (V, E) such that (1) T has no degree-2 internal nodes, (2) the ex...
A new computational method to study within-host viral evolution is explored to better understand the evolution and pathogenesis of viruses. Traditional phylogenetic tree methods a...
Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of evolutionary events acting at the population level, like recombin...
The paper compares six conventional binarization methods for the special purpose of subsequent analysis of scanned insect footprints. We introduce a new performance criterion for p...
Evolutionary relationships among species can be represented by a phylogenetic tree and inferred by optimising some measure of fitness, such as the statistical likelihood of the t...