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» Algorithms for phylogenetic footprinting
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JSS
2007
121views more  JSS 2007»
13 years 8 months ago
Opportunistic prioritised clustering framework for improving OODBMS performance
In object oriented database management systems, clustering has proven to be one of the most effective performance enhancement techniques. Existing clustering algorithms are mainly...
Zhen He, Richard Lai, Alonso Marquez, Stephen Blac...
OODBS
2000
110views Database» more  OODBS 2000»
14 years 12 hour ago
Opportunistic Prioritised Clustering Framework (OPCF)
Ever since the `early days' of database management systems, clustering has proven to be one of the most effective performance enhancement techniques for object oriented datab...
Zhen He, Alonso Marquez, Stephen Blackburn
IPPS
2009
IEEE
14 years 3 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
LION
2009
Springer
114views Optimization» more  LION 2009»
14 years 3 months ago
Substitution Matrices and Mutual Information Approaches to Modeling Evolution
Abstract. Substitution matrices are at the heart of Bioinformatics: sequence alignment, database search, phylogenetic inference, protein family classication are based on Blosum, P...
Stephan Kitchovitch, Yuedong Song, Richard C. van ...
PCI
2005
Springer
14 years 1 months ago
Web Service-Enabled Grid-Based Platform for Drug Resistance Management
HIV Drug Resistance testing has been established as a routine test in several cases. Estimation of genotypic resistance is a laborious task consisting of experimental procedure and...
Panagiotis Gouvas, G. Magiorkinis, Athanasios Bour...