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» Algorithms for the Topological Watershed
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EVOW
2010
Springer
14 years 2 months ago
Markov Chain Models for Genetic Algorithm Based Topology Control in MANETs
Abstract. We analyze the convergence properties of our force based genetic algorithm(fga) as a decentralized topology control mechanism distributed among software agents. fga guide...
Cem Safak Sahin, Stephen Gundry, Elkin Urrea, M. &...
GECCO
1999
Springer
116views Optimization» more  GECCO 1999»
14 years 1 months ago
Topologies, Migration Rates, and Multi-Population Parallel Genetic Algorithms
This paper presents a study of parallel genetic algorithms (GAs) with multiple populations (also called demes or islands). The study makes explicit the relation between the probab...
Erick Cantú-Paz
BMCBI
2005
114views more  BMCBI 2005»
13 years 9 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
14 years 1 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
NETWORKING
2007
13 years 10 months ago
Increasing the Coverage of a Cooperative Internet Topology Discovery Algorithm
Recently, Doubletree, a cooperative algorithm for large-scale topology discovery at the IP level, was introduced. Compared to classic probing systems, Doubletree discovers almost a...
Benoit Donnet, Bradley Huffaker, Timur Friedman, K...