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BMCBI
2005
134views more  BMCBI 2005»
13 years 7 months ago
Ancestral sequence alignment under optimal conditions
Background: Multiple genome alignment is an important problem in bioinformatics. An important subproblem used by many multiple alignment approaches is that of aligning two multipl...
Alexander K. Hudek, Daniel G. Brown 0001
BIOCOMP
2006
13 years 9 months ago
PAC: Progressive Alignment with Consensus Sequences
Computation of multiple sequence alignments is one of the major open problems in computational molecular biology. The purpose of this study was to provide a new method, PAC (Progre...
Ke Liu, Mansur H. Samadzadeh
WABI
2007
Springer
123views Bioinformatics» more  WABI 2007»
14 years 1 months ago
Inverse Sequence Alignment from Partial Examples
When aligning biological sequences, the choice of parameter values for the alignment scoring function is critical. Small changes in gap penalties, for example, can yield radically ...
Eagu Kim, John D. Kececioglu
FINTAL
2006
13 years 11 months ago
Evaluation of Alignment Methods for HTML Parallel Text
The Internet constitutes a potential huge store of parallel text that may be collected to be exploited by many applications such as multilingual information retrieval, machine tran...
Enrique Sánchez Villamil, Susana Santos-Ant...
ACL
2010
13 years 5 months ago
Letter-Phoneme Alignment: An Exploration
Letter-phoneme alignment is usually generated by a straightforward application of the EM algorithm. We explore several alternative alignment methods that employ phonetics, integer...
Sittichai Jiampojamarn, Grzegorz Kondrak