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JMLR
2012
12 years 1 months ago
Algorithms for Learning Kernels Based on Centered Alignment
This paper presents new and effective algorithms for learning kernels. In particular, as shown by our empirical results, these algorithms consistently outperform the so-called uni...
Corinna Cortes, Mehryar Mohri, Afshin Rostamizadeh
IPPS
2007
IEEE
14 years 5 months ago
Reconfigurable Architecture for Biological Sequence Comparison in Reduced Memory Space
DNA sequence alignment is a very important problem in bioinformatics. The algorithm proposed by Smith-Waterman (SW) is an exact method that obtains optimal local alignments in qua...
Azzedine Boukerche, Jan Mendonca Correa, Alba Cris...
AVBPA
2003
Springer
306views Biometrics» more  AVBPA 2003»
14 years 3 months ago
Fingerprint Alignment Using Similarity Histogram
The performance of fingerprint matching algorithm relies heavily on the accuracy of fingerprint alignment. Falsely aligning two feature sets extracted from two finger images of a f...
Tanghui Zhang, Jie Tian, Yuliang He, Xin Yang
ARC
2007
Springer
123views Hardware» more  ARC 2007»
14 years 2 months ago
Multiple Sequence Alignment Using Reconfigurable Computing
The alignment of multiple protein (or DNA) sequences is a current problem in Bioinformatics. ClustalW is the most popular heuristic algorithm for multiple sequence alignment. Pairw...
Carlos R. Erig Lima, Heitor S. Lopes, Maiko R. Mor...
NAR
2007
152views more  NAR 2007»
13 years 10 months ago
COMPASS server for remote homology inference
COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles f...
Ruslan Sadreyev, Ming Tang, Bong-Hyun Kim, Nick V....