391 search results - page 37 / 79 » Aligning Two Fragmented Sequences |
RECOMB
2005
Springer
14 years 10 months ago
2005
Springer
As one of the earliest problems in computational biology, RNA secondary structure prediction (sometimes referred to as "RNA folding") problem has attracted attention agai...
BMCBI
2008
13 years 10 months ago
2008
Background: Occult organizational structures in DNA sequences may hold the key to understanding functional and evolutionary aspects of the DNA molecule. Such structures can also p...
CPM
1994
Springer
14 years 2 months ago
1994
Springer
Recently, a new compact representation for suboptimal alignments was proposed by Naor and Brutlag (1993). The kernel of that representation is a minimal directed acyclic graph (DAG...
BIBM
2009
IEEE
14 years 1 months ago
2009
IEEE
We describe an algorithm for finding approximate seeds for DNA homology searches. In contrast to previous algorithms that use exact or spaced seeds, our approximate seeds may conta...
WABI
2005
Springer
14 years 3 months ago
2005
Springer
In contrast to proteins, many classes of functionally related RNA molecules show a rather weak sequence conservation but instead a fairly well conserved secondary structure. Hence ...