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» Aligning Two Fragmented Sequences
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BMCBI
2005
133views more  BMCBI 2005»
13 years 9 months ago
Systematic determination of the mosaic structure of bacterial genomes: species backbone versus strain-specific loops
Background: Public databases now contain multitude of complete bacterial genomes, including several genomes of the same species. The available data offers new opportunities to add...
Hélène Chiapello, I. Bourgait, F. So...
BMCBI
2008
130views more  BMCBI 2008»
13 years 10 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
DAM
2008
75views more  DAM 2008»
13 years 10 months ago
Patterns of simple gene assembly in ciliates
The intramolecular model for gene assembly in ciliates considers three operations, ld, hi, and dlad that can assemble any gene pattern through folding and recombination: the molec...
Tero Harju, Ion Petre, Vladimir Rogojin, Grzegorz ...
CVPR
2008
IEEE
14 years 12 months ago
Dense correspondence finding for parametrization-free animation reconstruction from video
We present a dense 3D correspondence finding method that enables spatio-temporally coherent reconstruction of surface animations from multi-view video data. Given as input a seque...
Naveed Ahmed, Christian Theobalt, Christian Rö...
DNA
2005
Springer
117views Bioinformatics» more  DNA 2005»
14 years 3 months ago
Simple Operations for Gene Assembly
Abstract. The intramolecular model for gene assembly in ciliates considers three operations, ld, hi, and dlad that can assemble any gene pattern through folding and recombination: ...
Tero Harju, Ion Petre, Vladimir Rogojin, Grzegorz ...