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» Aligning Two Fragmented Sequences
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SC
2009
ACM
14 years 4 months ago
Highly scalable genome assembly on campus grids
Bioinformatics researchers need efficient means to process large collections of sequence data. One application of interest, genome assembly, has great potential for parallelizati...
Christopher Moretti, Michael Olson, Scott J. Emric...
CVPR
2007
IEEE
14 years 1 months ago
Local Shape Registration Using Boundary-Constrained Match of Skeletons
This paper presents a new shape registration algorithm that establishes "meaningful correspondence" between objects, in that it preserves the local shape correspondence ...
Yun Zhu, Xenophon Papademetris, Albert J. Sinusas,...
CORR
2007
Springer
165views Education» more  CORR 2007»
13 years 10 months ago
Comparison of Tree-Child Phylogenetic Networks
Abstract—Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of non-treelike evolutionary events, like recombination, hybridization...
Gabriel Cardona, Francesc Rosselló, Gabriel...
BMCBI
2008
150views more  BMCBI 2008»
13 years 10 months ago
MOSAIC: an online database dedicated to the comparative genomics of bacterial strains at the intra-species level
Background: The recent availability of complete sequences for numerous closely related bacterial genomes opens up new challenges in comparative genomics. Several methods have been...
Hélène Chiapello, Annie Gendrault, C...
ENGL
2008
78views more  ENGL 2008»
13 years 10 months ago
Threshold for Positional Weight Matrix
In biological sequence research, the positional weight matrix (PWM) is often used to search for putative transcription factor binding sites. A set of experimentally verified oligon...
Yunlian Pan, Sieu Phan