Abstract. The alignment of different ontologies requires the specification, representation and execution of translation rules. The rules need to integrate translations at the lexic...
Fernando Silva Parreiras, Steffen Staab, Simon Sch...
Multiple sequence alignment of distantly related viral proteins remains a challenge to all currently available alignment methods. The hidden Markovmodel approach offers a new,flex...
We propose a registration algorithm based on successively refined quantization and an alignment metric derived from a minimal spanning tree entropy estimate. The metric favors edg...
In this paper, we present an algorithm to simultaneously align three biological sequences with affine gap model and infer their common ancestral sequence. Our algorithm can be fu...
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...