COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles f...
Ruslan Sadreyev, Ming Tang, Bong-Hyun Kim, Nick V....
This paper introduces a new discriminative learning technique for link prediction based on the matrix alignment approach. Our algorithm automatically determines the most predictiv...
Jerry Scripps, Pang-Ning Tan, Feilong Chen, Abdol-...
Rapid development of DNA sequencing technologies exponentially increases the amount of publicly available genomic data. Whole genome multiple sequence alignments represent a parti...
Pavol Hanus, Janis Dingel, Georg Chalkidis, Joachi...
We present Optima, a state of the art general purpose tool for ontology alignment that automatically identifies and matches relevant concepts between ontologies. The tool is supp...
This article describes a system for ontology alignment, SAMBO, and presents its results for the benchmark and anatomy tasks in the 2007 Ontology Alignment Evaluation Initiative. Fo...