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» Alignment of Non-Overlapping Sequences
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IPPS
2003
IEEE
14 years 4 months ago
Using Hybrid Alignment for Iterative Sequence Database Searches
Progressive sequence model refinement by means of iterative searches is an effective technique for high sensitivity database searches and is currently employed in popular tools s...
Yuheng Li, Mario Lauria, Ralf Bundschuh
PAMI
2002
85views more  PAMI 2002»
13 years 10 months ago
Spatio-Temporal Alignment of Sequences
This paper studies the problem of sequence-to-sequence alignment, namely, establishing correspondences in time and in space between two different video sequences of the same dynami...
Yaron Caspi, Michal Irani
GECCO
2003
Springer
128views Optimization» more  GECCO 2003»
14 years 4 months ago
Evolving Consensus Sequence for Multiple Sequence Alignment with a Genetic Algorithm
In this paper we present an approach that evolves the consensus sequence [25] for multiple sequence alignment (MSA) with genetic algorithm (GA). We have developed an encoding schem...
Conrad Shyu, James A. Foster
CPM
1998
Springer
115views Combinatorics» more  CPM 1998»
14 years 3 months ago
Aligning Alignments
d abstract) John Kececioglu and Dean Starrett Department of Computer Science The University of Arizona Tucson AZ 85721, USA A basic computational problem that arises in both the...
John D. Kececioglu, Weiqing Zhang
BIOINFORMATICS
2006
111views more  BIOINFORMATICS 2006»
13 years 10 months ago
Multiple Alignment of protein structures and sequences for VMD
Multiple Alignment is a new interface for performing and analyzing multiple protein structure alignments. It enables viewing levels of sequence and structure similarity on the ali...
John Eargle, Dan Wright, Zaida Luthey-Schulten