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» Alignment of Polarized Sets
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CICLING
2007
Springer
15 years 10 months ago
Characterizing Humour: An Exploration of Features in Humorous Texts
This paper investigates the problem of automatic humour recognition, and provides and in-depth analysis of two of the most frequently observed features of humorous text: human-cent...
Rada Mihalcea, Stephen G. Pulman
BMCBI
2006
139views more  BMCBI 2006»
15 years 4 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana
BMCBI
2005
87views more  BMCBI 2005»
15 years 4 months ago
ProfNet, a method to derive profile-profile alignment scoring functions that improves the alignments of distantly related protei
Background: Profile-profile methods have been used for some years now to detect and align homologous proteins. The best such methods use information from the background distributi...
Tomas Ohlson, Arne Elofsson
BMCBI
2006
134views more  BMCBI 2006»
15 years 4 months ago
A statistical score for assessing the quality of multiple sequence alignments
Background: Multiple sequence alignment is the foundation of many important applications in bioinformatics that aim at detecting functionally important regions, predicting protein...
Virpi Ahola, Tero Aittokallio, Mauno Vihinen, Esa ...
BMCBI
2006
156views more  BMCBI 2006»
15 years 4 months ago
Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments
Background: Molecular evolutionary studies of noncoding sequences rely on multiple alignments. Yet how multiple alignment accuracy varies across sequence types, tree topologies, d...
Daniel A. Pollard, Alan M. Moses, Venky N. Iyer, M...