Sciweavers

1016 search results - page 34 / 204
» Alignment of Polarized Sets
Sort
View
BMCBI
2010
198views more  BMCBI 2010»
15 years 4 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
BMCBI
2006
120views more  BMCBI 2006»
15 years 4 months ago
Optimizing amino acid substitution matrices with a local alignment kernel
Background: Detecting remote homologies by direct comparison of protein sequences remains a challenging task. We had previously developed a similarity score between sequences, cal...
Hiroto Saigo, Jean-Philippe Vert, Tatsuya Akutsu
BMCBI
2004
200views more  BMCBI 2004»
15 years 4 months ago
ABC: software for interactive browsing of genomic multiple sequence alignment data
Background: Alignment and comparison of related genome sequences is a powerful method to identify regions likely to contain functional elements. Such analyses are data intensive, ...
Gregory M. Cooper, Senthil A. G. Singaravelu, Aren...
150
Voted
IJCNLP
2005
Springer
15 years 9 months ago
Improving Statistical Word Alignment with Ensemble Methods
Abstract. This paper proposes an approach to improve statistical word alignment with ensemble methods. Two ensemble methods are investigated: bagging and cross-validation committee...
Hua Wu, Haifeng Wang
ARC
2007
Springer
123views Hardware» more  ARC 2007»
15 years 8 months ago
Multiple Sequence Alignment Using Reconfigurable Computing
The alignment of multiple protein (or DNA) sequences is a current problem in Bioinformatics. ClustalW is the most popular heuristic algorithm for multiple sequence alignment. Pairw...
Carlos R. Erig Lima, Heitor S. Lopes, Maiko R. Mor...