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» Alignment of Polarized Sets
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GECCO
2006
Springer
171views Optimization» more  GECCO 2006»
15 years 7 months ago
A hybrid genetic search for multiple sequence alignment
This paper proposes a hybrid genetic algorithm for multiple sequence alignment. The algorithm evolves guide sequences and aligns input sequences based on the guide sequences. It a...
Seung-Hyun Moon, Sung-Soon Choi, Byung Ro Moon
135
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ISCAPDCS
2007
15 years 5 months ago
PARALLEL-TCOFFEE: A parallel multiple sequence aligner
In this paper we present a parallel implementation of T–Coffee — a widely used multiple sequence alignment package. Our software supports a majority of options provided by the...
Jaroslaw Zola, Xiao Yang, Adrian Rospondek, Sriniv...
CORR
2010
Springer
132views Education» more  CORR 2010»
15 years 3 months ago
Performance of Interference Alignment in Clustered Wireless Ad Hoc Networks
Abstract--Spatial interference alignment among a finite number of users is investigated as a technique to increase the probability of successful transmission in an interference lim...
Roland Tresch, Maxime Guillaud
RECOMB
2003
Springer
16 years 4 months ago
Accurate detection of very sparse sequence motifs
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...
Andreas Heger, Michael Lappe, Liisa Holm
BMCBI
2006
116views more  BMCBI 2006»
15 years 4 months ago
TaxMan: a taxonomic database manager
Background: Phylogenetic analysis of large, multiple-gene datasets, assembled from public sequence databases, is rapidly becoming a popular way to approach difficult phylogenetic ...
Martin Jones, Mark Blaxter