70 search results - page 6 / 14 » Alignment of RNA base pairing probability matrices |
BMCBI
2004
13 years 7 months ago
2004
Background: For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements in multiple-genome datasets, it is useful to be able to derive multi-sequence ...
BMCBI
2010
13 years 7 months ago
2010
Background: To understand an RNA sequence's mechanism of action, the structure must be known. Furthermore, target RNA structure is an important consideration in the design of...
ICASSP
2007
IEEE
14 years 1 months ago
2007
IEEE
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...
BMCBI
2008
13 years 7 months ago
2008
Background: The prediction of a consensus structure for a set of related RNAs is an important first step for subsequent analyses. RNAalifold, which computes the minimum energy str...
ACL
2009
13 years 5 months ago
2009
In this paper we present a confidence measure for word alignment based on the posterior probability of alignment links. We introduce sentence alignment confidence measure and alig...