Abstract—We consider the problem of aligning multiple protein sequences with the goal of maximizing the SP (Sum-of-Pairs) score, when the number of sequences is large. The QOMA (...
Background: Automated software tools for multiple alignment often fail to produce biologically meaningful results. In such situations, expert knowledge can help to improve the qua...
Burkhard Morgenstern, Sonja J. Prohaska, Dirk P&ou...
The use of unlabeled data to aid classification is important as labeled data is often available in limited quantity. Instead of utilizing training samples directly into semi-super...
In this paper we propose an inexact spectral matching algorithm that embeds large graphs on a low-dimensional isometric space spanned by a set of eigenvectors of the graph Laplacia...
David Knossow, Avinash Sharma, Diana Mateus, Radu ...
—The rapid burgeoning of available protein data makes the use of clustering within families of proteins increasingly important, the challenge is to identify subfamilies of evolut...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski