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» Alignment using Spectral Clusters
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BMCBI
2006
166views more  BMCBI 2006»
13 years 10 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
NAR
1998
161views more  NAR 1998»
13 years 9 months ago
Touring protein fold space with Dali/FSSP
The FSSP database and its new supplement, the Dali Domain Dictionary, present a continuously updated classification of all known 3D protein structures. The classification is deriv...
Liisa Holm, Chris Sander
CONEXT
2006
ACM
14 years 1 months ago
Early application identification
The automatic detection of applications associated with network traffic is an essential step for network security and traffic engineering. Unfortunately, simple port-based classif...
Laurent Bernaille, Renata Teixeira, Kavé Sa...
ISI
2007
Springer
14 years 4 months ago
Detecting Anomalies in Graphs
Graph data represents relationships, connections, or affinities. Innocent relationships produce repeated, and so common, substructures in graph data. We present techniques for dis...
David B. Skillicorn
BMCBI
2008
130views more  BMCBI 2008»
13 years 10 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi