139 search results - page 5 / 28 » Alignment-Free Phylogenetic Reconstruction |
JCB
2002
13 years 7 months ago
2002
This paper investigates the standard ordinary least-squares version 24 and the balanced version 20 of the minimum evolution principle. For the standard version, we provide a greedy...
MFCS
2005
Springer
14 years 27 days ago
2005
Springer
Abstract. Given a distance matrix M that specifies the pairwise evolutionary distances between n species, the phylogenetic tree reconstruction problem asks for an edge-weighted ph...
IPPS
2007
IEEE
14 years 1 months ago
2007
IEEE
Bayesian phylogenetic inference is an important alternative to maximum likelihood-based phylogenetic method. However, inferring large trees using the Bayesian approach is computat...
ALMOB
2008
13 years 7 months ago
2008
Motivation: Sequence-based methods for phylogenetic reconstruction from (nucleic acid) sequence data are notoriously plagued by two effects: homoplasies and alignment errors. Larg...
TCBB
2010
13 years 5 months ago
2010
— We explore the maximum parsimony (MP) and ancestral maximum likelihood (AML) criteria in phylogenetic tree reconstruction. Both problems are NP hard, so we seek approximate sol...