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» Alignments of RNA Structures
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NAR
2007
90views more  NAR 2007»
13 years 7 months ago
The SUPERFAMILY database in 2007: families and functions
The SUPERFAMILY database provides protein domain assignments, at the SCOP ‘superfamily’ level, for the predicted protein sequences in over 400 completed genomes. A superfamily...
Derek Wilson, Martin Madera, Christine Vogel, Cyru...
CVPR
2010
IEEE
13 years 5 months ago
Multi-structure model selection via kernel optimisation
Our goal is to fit the multiple instances (or structures) of a generic model existing in data. Here we propose a novel model selection scheme to estimate the number of genuine str...
Tat-Jun Chin, David Suter, Hanzi Wang
EMNLP
2010
13 years 5 months ago
Joint Inference for Bilingual Semantic Role Labeling
We show that jointly performing semantic role labeling (SRL) on bitext can improve SRL results on both sides. In our approach, we use monolingual SRL systems to produce argument c...
Tao Zhuang, Chengqing Zong
BMCBI
2008
135views more  BMCBI 2008»
13 years 7 months ago
Functional site prediction selects correct protein models
Background: The prediction of protein structure can be facilitated by the use of constraints based on a knowledge of functional sites. Without this information it is still possibl...
Vijayalakshmi Chelliah, William R. Taylor
BMCBI
2006
242views more  BMCBI 2006»
13 years 7 months ago
Predicting residue-wise contact orders in proteins by support vector regression
Background: The residue-wise contact order (RWCO) describes the sequence separations between the residues of interest and its contacting residues in a protein sequence. It is a ne...
Jiangning Song, Kevin Burrage