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» Alignments of RNA Structures
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BMCBI
2006
142views more  BMCBI 2006»
13 years 7 months ago
RDMAS: a web server for RNA deleterious mutation analysis
Background: The diverse functions of ncRNAs critically depend on their structures. Mutations in ncRNAs disrupting the structures of functional sites are expected to be deleterious...
Wenjie Shu, Xiaochen Bo, Rujia Liu, Dongsheng Zhao...
ACL
2010
13 years 5 months ago
Exploring Syntactic Structural Features for Sub-Tree Alignment Using Bilingual Tree Kernels
We propose Bilingual Tree Kernels (BTKs) to capture the structural similarities across a pair of syntactic translational equivalences and apply BTKs to sub-tree alignment along wi...
Jun Sun, Min Zhang, Chew Lim Tan
AMTA
2004
Springer
14 years 1 months ago
Multi-align: Combining Linguistic and Statistical Techniques to Improve Alignments for Adaptable MT
Abstract. An adaptable statistical or hybrid MT system relies heavily on the quality of word-level alignments of real-world data. Statistical alignment approaches provide a reasona...
Necip Fazil Ayan, Bonnie J. Dorr, Nizar Habash
BIOCOMP
2006
13 years 9 months ago
PAC: Progressive Alignment with Consensus Sequences
Computation of multiple sequence alignments is one of the major open problems in computational molecular biology. The purpose of this study was to provide a new method, PAC (Progre...
Ke Liu, Mansur H. Samadzadeh
AINA
2008
IEEE
14 years 2 months ago
Protein Structure Comparison and Alignment Using Residue Contexts
We introduce a method for comparing protein structures using the notion of residue contexts based on protein Cα-atom backbones. The residue context is derived from the set of vec...
Tobias Sayre, Rahul Singh