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» Alignments of RNA Structures
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NAR
2006
119views more  NAR 2006»
13 years 8 months ago
HHsenser: exhaustive transitive profile search using HMM-HMM comparison
HHsenser is the first server to offer exhaustive intermediate profile searches, which it combines with pairwise comparison of hidden Markov models. Starting from a single protein ...
Johannes Söding, Michael Remmert, Andreas Bie...
CSB
2005
IEEE
140views Bioinformatics» more  CSB 2005»
14 years 1 months ago
TPR Packing Analysis and 3D Modeling for the HAT Domain of Human Crooked Neck Protein
Human crooked neck protein (hcrn) containing 17 HAT or TPR repeats plays a role in pre-mRNA processing. Conserved residues in the TPR consensus sequence of 34 aa were found at hel...
Zhenglin Hou, Cunxi Wang, Odd-Arne Olsen
ISMB
2003
13 years 9 months ago
PSI: indexing protein structures for fast similarity search
We consider the problem of finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements). Later, ...
Orhan Çamoglu, Tamer Kahveci, Ambuj K. Sing...
MLMI
2004
Springer
14 years 1 months ago
Using Static Documents as Structured and Thematic Interfaces to Multimedia Meeting Archives
Abstract. Static documents play a central role in multimodal applications such as meeting recording and browsing. They provide a variety of structures, in particular thematic, for ...
Denis Lalanne, Rolf Ingold, Didier von Rotz, Ardhe...
JUCS
2006
141views more  JUCS 2006»
13 years 8 months ago
Constraint Based Methods for Biological Sequence Analysis
: The need for processing biological information is rapidly growing, owing to the masses of new information in digital form being produced at this time. Old methodologies for proce...
Maryam Bavarian, Verónica Dahl