This paper introduces a simple Sum-over-Paths (SoP) formulation of string edit distances accounting for all possible alignments between two sequences, and extends related previous...
: Docking is one of the most commonly used techniques in drug design. It is used for both identifying correct poses of a ligand in the binding site of a protein as well as for the ...
Dariusz Plewczynski, Michal Lazniewski, Rafal Augu...
This paper introduces a new family of string classifiers based on local relatedness. We use three types of local relatedness measurements, namely, longest common substrings (LCStr&...
There is an increasing need for an XML query engine that not only searches for exact matches to a query but also returns “query-like” structures. We have designed and develope...
Two algorithms are presented that solve the problem of recovering the longest common subsequence of two strings. The £rst algorithm is an improvement of Hirschberg’s divide-andc...
Maxime Crochemore, Costas S. Iliopoulos, Yoan J. P...