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ALMOB
2008
131views more  ALMOB 2008»
13 years 8 months ago
Fast algorithms for computing sequence distances by exhaustive substring composition
The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
Alberto Apostolico, Olgert Denas
BMCBI
2008
149views more  BMCBI 2008»
13 years 8 months ago
Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence
Background: Modern proteomes evolved by modification of pre-existing ones. It is extremely important to comparative biology that related proteins be identified as members of the s...
Adriano Barbosa-Silva, Venkata P. Satagopam, Reinh...
ICCBR
2010
Springer
13 years 6 months ago
Taxonomic Semantic Indexing for Textual Case-Based Reasoning
Abstract. Case-Based Reasoning (CBR) solves problems by reusing past problemsolving experiences maintained in a casebase. The key CBR knowledge container therefore is its casebase....
Juan A. Recio-García, Nirmalie Wiratunga
JMLR
2010
147views more  JMLR 2010»
13 years 3 months ago
Image Denoising with Kernels Based on Natural Image Relations
A successful class of image denoising methods is based on Bayesian approaches working in wavelet representations. The performance of these methods improves when relations among th...
Valero Laparra, Juan Gutierrez, Gustavo Camps-Vall...
BIOINFORMATICS
2011
13 years 7 days ago
A method for probing the mutational landscape of amyloid structure
Motivation: Proteins of all kinds can self-assemble into highly ordered β-sheet aggregates known as amyloid fibrils, important both biologically and clinically. However, the spe...
Charles W. O'Donnell, Jérôme Waldisp&...