Determining the number and location of disulfide bonds within a protein provide valuable insight into the protein’s three-dimensional structure. Purely computational methods tha...
Timothy Lee, Rahul Singh, Ten-Yang Yen, Bruce Mach...
Finding all the occurrences of a twig pattern on multiple elements in an XML document is a core operation for efficient evaluation of XML queries. Holistic twig join algorithms, Tw...
Incremental mining of sequential patterns from data streams is one of the most challenging problems in mining data streams. However, previous work of mining sequential patterns fr...
The tertiary structure and biological function of a protein can be better understood given knowledge of the number and location of its disulfide bonds. By utilizing mass spectrome...
Timothy Lee, Rahul Singh, Ten-Yang Yen, Bruce Mach...
We study two pattern matching problems that are motivated by applications in computational biology. In the Closest Substring problem k strings s1, . . ., sk are given, and the tas...