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BMCBI
2010
198views more  BMCBI 2010»
13 years 7 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
BMCBI
2010
136views more  BMCBI 2010»
13 years 7 months ago
SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale
Background: An important problem in genomics is the automatic inference of groups of homologous proteins from pairwise sequence similarities. Several approaches have been proposed...
Tamás Nepusz, Rajkumar Sasidharan, Alberto ...
IPPS
2010
IEEE
13 years 5 months ago
Inter-block GPU communication via fast barrier synchronization
The graphics processing unit (GPU) has evolved from a fixedfunction processor with programmable stages to a programmable processor with many fixed-function components that deliver...
Shucai Xiao, Wu-chun Feng
MIDDLEWARE
2004
Springer
14 years 13 days ago
A hierarchical process execution support for grid computing
Grid is an emerging infrastructure used to share resources among virtual organizations in a seamless manner and to provide breakthrough computing power at low cost. Nowadays there...
Fábio R. L. Cicerre, Edmundo Roberto Mauro ...
FCCM
2002
IEEE
127views VLSI» more  FCCM 2002»
14 years 1 days ago
Hardware-Assisted Fast Routing
To fully realize the benefits of partial and rapid reconfiguration of field-programmable devices, we often need to dynamically schedule computing tasks and generate instance-sp...
André DeHon, Randy Huang, John Wawrzynek