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» An Efficient Method for Multiple Sequence Alignment
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PRL
2011
13 years 3 months ago
Temporal synchronization of non-overlapping videos using known object motion
This paper presents a robust technique for temporally aligning multiple video sequences that have no spatial overlap between their fields of view. It is assumed that (i) a moving...
Darlan N. Brito, Flávio L. C. Pádua,...
BIB
2007
101views more  BIB 2007»
13 years 8 months ago
Discovering and detecting transposable elements in genome sequences
The contribution of transposable elements (TEs) to genome structure and evolution as well as their impact on genome sequencing, assembly, annotation and alignment has generated in...
Casey M. Bergman, Hadi Quesneville
RECOMB
2003
Springer
14 years 8 months ago
Haplotype reconstruction from SNP alignment
In this paper, we describe a method for statistical reconstruction of haplotypes from a set of aligned SNP fragments. We consider the case of a pair of homologous human chromosome...
Lei Li, Jong Hyun Kim, Michael S. Waterman
BMCBI
2004
146views more  BMCBI 2004»
13 years 8 months ago
The InDeVal insertion/deletion evaluation tool: a program for finding target regions in DNA sequences and for aiding in sequence
Background: The program InDeVal was originally developed to help researchers find known regions of insertion/deletion activity (with the exception of isolated single-base indels) ...
Sierra D. Stoneberg Holt, Jason A. Holt
BMCBI
2008
99views more  BMCBI 2008»
13 years 8 months ago
Multiple organism algorithm for finding ultraconserved elements
Background: Ultraconserved elements are nucleotide or protein sequences with 100% identity (no mismatches, insertions, or deletions) in the same organism or between two or more or...
Scott Christley, Neil F. Lobo, Gregory R. Madey