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» An Efficient Method for Multiple Sequence Alignment
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BMCBI
2006
124views more  BMCBI 2006»
13 years 8 months ago
Predicting transcription factor binding sites using local over-representation and comparative genomics
Background: Identifying cis-regulatory elements is crucial to understanding gene expression, which highlights the importance of the computational detection of overrepresented tran...
Matthieu Defrance, Hélène Touzet
ICIP
2010
IEEE
13 years 6 months ago
Fast traumatic brain injury CT slice indexing via anatomical feature classification
Computed tomography (CT) is used widely in traumatic brain injury diagnosis. One axial brain CT scan consists of multiple slices with different heights along the brain axial direc...
Ruizhe Liu, Shimiao Li, Chew Lim Tan, Boon Chuan P...
ACMMSP
2004
ACM
125views Hardware» more  ACMMSP 2004»
14 years 1 months ago
Improving trace cache hit rates using the sliding window fill mechanism and fill select table
As superscalar processors become increasingly wide, it is inevitable that the large set of instructions to be fetched every cycle will span multiple noncontiguous basic blocks. Th...
Muhammad Shaaban, Edward Mulrane
BMCBI
2006
98views more  BMCBI 2006»
13 years 8 months ago
Quantitative comparison of EST libraries requires compensation for systematic biases in cDNA generation
Background: Publicly accessible EST libraries contain valuable information that can be utilized for studies of tissue-specific gene expression and processing of individual genes. ...
Donglin Liu, Joel H. Graber
BMCBI
2011
12 years 11 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...