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    TREC
    2004
    123views Information Technology» more  TREC 2004»
    Concept Extraction and Synonymy Management for Biomedical Information Retrieval
    13 years 8 months ago
    Concept Extraction and Synonymy Management for Biomedical Information Retrieval
    Download  trec.nist.gov
    This paper reports on work done for the Genomics Track at TREC 2004 by ConverSpeech LLC in conjunction with scientists at the Saccharomyces Genome Database (SGD), the model organi...
    Colleen E. Crangle, Alex Zbyslaw, J. Michael Cherr...
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    BMCBI
    2010
    146views more  BMCBI 2010»
    Revealing and avoiding bias in semantic similarity scores for protein pairs
    13 years 7 months ago
    Revealing and avoiding bias in semantic similarity scores for protein pairs
    Download  www.biomedcentral.com
    Background: Semantic similarity scores for protein pairs are widely applied in functional genomic researches for finding functional clusters of proteins, predicting protein functi...
    Jing Wang 0004, Xianxiao Zhou, Jing Zhu, Chenggui ...
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    BMCBI
    2005
    155views more  BMCBI 2005»
    Mining protein function from text using term-based support vector machines
    13 years 7 months ago
    Mining protein function from text using term-based support vector machines
    Download  www.biomedcentral.com
    Background: Text mining has spurred huge interest in the domain of biology. The goal of the BioCreAtIvE exercise was to evaluate the performance of current text mining systems. We...
    Simon B. Rice, Goran Nenadic, Benjamin J. Stapley
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    JIB
    2006
    220views more  JIB 2006»
    An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
    13 years 7 months ago
    An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
    Download  journal.imbio.de
    Protein-protein interactions (PPI) play a key role in many biological systems. Over the past few years, an explosion in availability of functional biological data obtained from hi...
    Fiona Browne, Haiying Wang, Huiru Zheng, Francisco...
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    BMCBI
    2011
    290views Artificial Intelligence» more  BMCBI 2011»
    Errors in CGAP xProfiler and cDNA DGED: the importance of library parsing and gene selection algorithms
    13 years 2 months ago
    Errors in CGAP xProfiler and cDNA DGED: the importance of library parsing and gene selection algorithms
    Download  www.biomedcentral.com
    Background: The Cancer Genome Anatomy Project (CGAP) xProfiler and cDNA Digital Gene Expression Displayer (DGED) have been made available to the scientific community over a decade...
    Andrew T. Milnthorpe, Mikhail Soloviev
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