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» An Exact Brownian Dynamics Method for Cell Simulation
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BMCBI
2008
146views more  BMCBI 2008»
13 years 7 months ago
A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
Background: The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a nu...
Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha
CPHYSICS
2008
121views more  CPHYSICS 2008»
13 years 7 months ago
A scalable parallel algorithm for large-scale reactive force-field molecular dynamics simulations
A scalable parallel algorithm has been designed to perform multimillion-atom molecular dynamics (MD) simulations, in which first principlesbased reactive force fields (ReaxFF) des...
Ken-ichi Nomura, Rajiv K. Kalia, Aiichiro Nakano, ...
LSMS
2007
Springer
14 years 1 months ago
AOC-by-Self-discovery Modeling and Simulation for HIV
Among HIV, immune cell and drug, exhibit interactions that are usually not well understood and as a result, cannot be accurately modeled. In this paper, Modeling by AOC is to under...
Chunxiao Zhao, Ning Zhong, Ying Hao
TPDS
2002
97views more  TPDS 2002»
13 years 7 months ago
On Distributed Dynamic Channel Allocation in Mobile Cellular Networks
Distributed dynamic channel allocation (DDCA) is a fundamental resource management problem in mobile cellular networks. It has a flavor of distributed mutual exclusion but is not e...
Jianping Jiang, Ten-Hwang Lai, Neelam Soundarajan
BMCBI
2006
117views more  BMCBI 2006»
13 years 7 months ago
A method for estimation of elasticities in metabolic networks using steady state and dynamic metabolomics data and linlog kineti
Background: Dynamic modeling of metabolic reaction networks under in vivo conditions is a crucial step in order to obtain a better understanding of the (dis)functioning of living ...
I. Emrah Nikerel, Wouter A. van Winden, Walter M. ...