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BMCBI
2006
108views more  BMCBI 2006»
13 years 8 months ago
Probe set algorithms: is there a rational best bet?
Affymetrix microarrays have become a standard experimental platform for studies of mRNA expression profiling. Their success is due, in part, to the multiple oligonucleotide featur...
Jinwook Seo, Eric P. Hoffman
BMCBI
2006
112views more  BMCBI 2006»
13 years 8 months ago
Protein disorder prediction by condensed PSSM considering propensity for order or disorder
Background: More and more disordered regions have been discovered in protein sequences, and many of them are found to be functionally significant. Previous studies reveal that dis...
Chung-Tsai Su, Chien-Yu Chen, Yu-Yen Ou
BMCBI
2006
127views more  BMCBI 2006»
13 years 8 months ago
Using local gene expression similarities to discover regulatory binding site modules
Background: We present an approach designed to identify gene regulation patterns using sequence and expression data collected for Saccharomyces cerevisae. Our main goal is to rela...
Bartek Wilczynski, Torgeir R. Hvidsten, Andriy Kry...
BMCBI
2006
128views more  BMCBI 2006»
13 years 8 months ago
Rank-statistics based enrichment-site prediction algorithm developed for chromatin immunoprecipitation on chip experiments
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
CORR
2006
Springer
143views Education» more  CORR 2006»
13 years 8 months ago
A Knowledge-Based Approach for Selecting Information Sources
Through the Internet and the World-Wide Web, a vast number of information sources has become available, which offer information on various subjects by different providers, often i...
Thomas Eiter, Michael Fink, Hans Tompits
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